Shiny bindings for oncoplot — oncoplot-shiny • plotomics

Output and render functions for using oncoplot() within Shiny applications and interactive R Markdown / Quarto documents.

Usage

oncoplotOutput(output_id, width = "100%", height = "560px")

renderOncoplot(expr, env = parent.frame(), quoted = FALSE)

Arguments

output_id: Output variable to read from.
width, height: Element size, passed to htmlwidgets::shinyWidgetOutput().
expr: An expression that generates an oncoplot() widget.
env: The environment in which to evaluate expr.
quoted: Is expr already quoted? Defaults to FALSE.

Value

oncoplotOutput() returns a Shiny output UI element; renderOncoplot() returns a Shiny render function.

Examples

if (interactive() && requireNamespace("shiny", quietly = TRUE)) {
  ui <- fluidPage(oncoplotOutput("onco"))
  server <- function(input, output) {
    output$onco <- renderOncoplot({
      oncoplot(data.frame(
        gene = c("TP53", "KRAS"), sample = c("S1", "S2"),
        class = "missense"
      ))
    })
  }
  shinyApp(ui, server)
}