Pure. Known variants at the residue.
Usage
protvar_parse_population(body)
Arguments
- body
A parsed ProtVar /population response.
Value
A tibble of change and sources, where sources is a
comma-separated list of distinct source names. NULL when there are no
variants.
Sources are deduplicated
A variant carries one cross-reference per supporting record, so the same
source name recurs many times: the TP53 175 fixture lists NCI-TCGA four
times for a single change. Reporting them raw makes a single database look
like corroboration from several.
Examples
body <- list(variants = list(list(
alternativeSequence = "Cys",
xrefs = list(list(name = "NCI-TCGA"), list(name = "NCI-TCGA"))
)))
protvar_parse_population(body)
#> # A tibble: 1 × 2
#> change sources
#> <chr> <chr>
#> 1 Cys NCI-TCGA
