Annotate many variants in one request

Usage

myvariant_variants(ids, assembly = "hg38", fields = MYVARIANT_FIELDS, ...)

Arguments

ids: MyVariant ids. Build them with myvariant_id().
assembly: The genome assembly. Changing this from "hg38" only makes sense for genuinely GRCh37 coordinates.
fields: The MyVariant fields to request.
...: Passed to biohttp::post_json(), for example throttle.

Value

A biohttp envelope whose data is a tibble with one row per entry in ids, in the same order. See myvariant_parse_batch().

assembly is not optional

assembly = "hg38" is always sent. Without it MyVariant answers 200 with notfound for every GRCh38 variant, so a whole cohort disappears with no error anywhere. There is no way to omit it through this function, and that is deliberate.

Examples

if (FALSE) { # \dontrun{
ids <- myvariant_id("17", 7676154, "G", "C")
biohttp::body_or_null(myvariant_variants(ids))
} # }