Turn a gnomAD variant response into a frequency record — gnomad_parse_frequency • bioclients

Pure.

Usage

gnomad_parse_frequency(body, dataset = GNOMAD_DATASET)

Arguments

body: A parsed gnomAD GraphQL response body.
dataset: The dataset that was queried, carried through to the result.

Value

A list of variant_id, dataset, exome, genome, and populations, or NULL when the body carries no variant.

Examples

body <- list(data = list(variant = list(
  variant_id = "7-140753336-A-T",
  exome = list(af = 0.001, ac = 2, an = 2000)
)))
gnomad_parse_frequency(body)$variant_id
#> [1] "7-140753336-A-T"