Genes DISEASES associates with a disease, from one channel

Usage

diseases_channel(
  doid,
  channel = c("Knowledge", "Textmining"),
  limit = 300,
  ...
)

Arguments

doid: A Disease Ontology id, for example "DOID:0060293".
channel: "Knowledge" for curated associations or "Textmining" for mined ones.
limit: Maximum genes to ask for.
...: Passed to biohttp::get_json(), for example throttle.

Value

A biohttp envelope whose data is the tibble described in diseases_parse_channel().

References

Pletscher-Frankild et al. (2015). DISEASES: text mining and data integration of disease-gene associations. Methods 74, 83-89. doi:10.1016/j.ymeth.2014.11.020

Service documentation: https://diseases.jensenlab.org/

Examples

# \donttest{
biohttp::body_or_null(diseases_channel("DOID:0060293", "Knowledge"))
#> NULL
# }